#Xming sourceforge pdf
Visit and ParaView are two common HPC visualization packages and will be used in the Tuesday lab. TCPDF - PHP class for PDF TCPDF is a PHP class for generating PDF documents without requiring external extensions. R and Python will be available on the cluster but can easily be installed on your systems as well.
We will be touching on several software packages during the labs and discussion. If you would like more information about Nano, visit the sites below: Xming allows the Windows machines to display a graphical linux program which is basically running on a remote Linux server. We will use Nano to demonstrate most things but if you are familiar with another editor (emacs ,vi, gedit, etc.) that is fine. Xming is an open source X-Windows terminal emulator (X Server) that runs on Microsoft Windows computers. One very simple editor that is commonly available on Unix systems is called nano. In fact they can add unintended characters that can be an issue (We will touch on this during the workshop). Word, WordPad, and Notepad are not usually available. The editing of text files is a common occurrence for HPC applications. If not, a common solution is to install PuTTy for SSH, Xming for X forwarding, and a program like FileZilla for SFTP.ĭirections for installing PuTTy and Xming can be found here: Your institution or school may have one available.
There are many commercial and open solutions. Windows requires the installation of third party tools to provide these features. Linux and Apple’s OSX have SSH, X forwarding, and SFTP built-in. Secure File Transfer Protocol (SFTP) is also used to move files to and from the HPC resource. This is accomplished through the use of SSH and often utilizes window forward through X. The labs will require logging into the NAUTILUS machine. HPC application of R and other codes for biological research NIMBioS Tutorial: Migration from the Desktop